Visualization of the mycelia of wood-rotting fungi by fluorescence in situ hybridization using a peptide nucleic acid probe.
Identifieur interne : 000354 ( Main/Exploration ); précédent : 000353; suivant : 000355Visualization of the mycelia of wood-rotting fungi by fluorescence in situ hybridization using a peptide nucleic acid probe.
Auteurs : Yuji Nakada [Japon] ; Satoshi Nakaba ; Hiroshi Matsunaga ; Ryo Funada ; Makoto YoshidaSource :
- Bioscience, biotechnology, and biochemistry [ 1347-6947 ] ; 2013.
Descripteurs français
- KwdFr :
- ARN ribosomique 18S (analyse), Acides nucléiques peptidiques (composition chimique), Bois (microbiologie), Hybridation fluorescente in situ (méthodes), Microscopie de fluorescence (MeSH), Mycelium (croissance et développement), Mycelium (ultrastructure), Phanerochaete (croissance et développement), Phanerochaete (ultrastructure), Polyporales (croissance et développement), Polyporales (ultrastructure), Sondes d'acide nucléique (composition chimique).
- MESH :
- analyse : ARN ribosomique 18S.
- composition chimique : Acides nucléiques peptidiques, Sondes d'acide nucléique.
- croissance et développement : Mycelium, Phanerochaete, Polyporales.
- microbiologie : Bois.
- méthodes : Hybridation fluorescente in situ.
- ultrastructure : Microscopie de fluorescence, Mycelium, Phanerochaete, Polyporales.
English descriptors
- KwdEn :
- In Situ Hybridization, Fluorescence (methods), Microscopy, Fluorescence (MeSH), Mycelium (growth & development), Mycelium (ultrastructure), Nucleic Acid Probes (chemistry), Peptide Nucleic Acids (chemistry), Phanerochaete (growth & development), Phanerochaete (ultrastructure), Polyporales (growth & development), Polyporales (ultrastructure), RNA, Ribosomal, 18S (analysis), Wood (microbiology).
- MESH :
- chemical , analysis : RNA, Ribosomal, 18S.
- chemical , chemistry : Nucleic Acid Probes, Peptide Nucleic Acids.
- growth & development : Mycelium, Phanerochaete, Polyporales.
- methods : In Situ Hybridization, Fluorescence.
- microbiology : Wood.
- ultrastructure : Mycelium, Phanerochaete, Polyporales.
- Microscopy, Fluorescence.
Abstract
White rot fungus, Phanerochaete chrysosporium, and brown rot fungus, Postia placenta, grown on agar plates, were visualized by fluorescence in situ hybridization (FISH) using a peptide nucleic acid (PNA) probe. Mycelia grown on wood chips were also clearly detected by PNA-FISH following blocking treatment. To the best of our knowledge, this is the first report on the visualization of fungi in wood by FISH.
DOI: 10.1271/bbb.120777
PubMed: 23391931
Affiliations:
Links toward previous steps (curation, corpus...)
Le document en format XML
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Matsunaga</name></author><author><name sortKey="Funada, Ryo" sort="Funada, Ryo" uniqKey="Funada R" first="Ryo" last="Funada">Ryo Funada</name></author><author><name sortKey="Yoshida, Makoto" sort="Yoshida, Makoto" uniqKey="Yoshida M" first="Makoto" last="Yoshida">Makoto Yoshida</name></author></titleStmt><publicationStmt><idno type="wicri:source">PubMed</idno><date when="2013">2013</date><idno type="RBID">pubmed:23391931</idno><idno type="pmid">23391931</idno><idno type="doi">10.1271/bbb.120777</idno><idno type="wicri:Area/Main/Corpus">000378</idno><idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Corpus" wicri:corpus="PubMed">000378</idno><idno type="wicri:Area/Main/Curation">000378</idno><idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Curation">000378</idno><idno type="wicri:Area/Main/Exploration">000378</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en">Visualization of the mycelia of wood-rotting fungi by fluorescence in situ hybridization using a peptide nucleic acid probe.</title><author><name sortKey="Nakada, Yuji" sort="Nakada, Yuji" uniqKey="Nakada Y" first="Yuji" last="Nakada">Yuji Nakada</name><affiliation wicri:level="3"><nlm:affiliation>Tokyo University of Agriculture and Technology, Fuchu, Tokyo, Japan.</nlm:affiliation><country xml:lang="fr">Japon</country><wicri:regionArea>Tokyo University of Agriculture and Technology, Fuchu, Tokyo</wicri:regionArea><placeName><settlement type="city">Tokyo</settlement><region type="région">Région de Kantō</region></placeName></affiliation></author><author><name sortKey="Nakaba, Satoshi" sort="Nakaba, Satoshi" uniqKey="Nakaba S" first="Satoshi" last="Nakaba">Satoshi Nakaba</name></author><author><name sortKey="Matsunaga, Hiroshi" sort="Matsunaga, Hiroshi" uniqKey="Matsunaga H" first="Hiroshi" last="Matsunaga">Hiroshi Matsunaga</name></author><author><name sortKey="Funada, Ryo" sort="Funada, Ryo" uniqKey="Funada R" first="Ryo" last="Funada">Ryo Funada</name></author><author><name sortKey="Yoshida, Makoto" sort="Yoshida, Makoto" uniqKey="Yoshida M" first="Makoto" last="Yoshida">Makoto Yoshida</name></author></analytic><series><title level="j">Bioscience, biotechnology, and biochemistry</title><idno type="eISSN">1347-6947</idno><imprint><date when="2013" type="published">2013</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>In Situ Hybridization, Fluorescence (methods)</term><term>Microscopy, Fluorescence (MeSH)</term><term>Mycelium (growth & development)</term><term>Mycelium (ultrastructure)</term><term>Nucleic Acid Probes (chemistry)</term><term>Peptide Nucleic Acids (chemistry)</term><term>Phanerochaete (growth & development)</term><term>Phanerochaete (ultrastructure)</term><term>Polyporales (growth & development)</term><term>Polyporales (ultrastructure)</term><term>RNA, Ribosomal, 18S (analysis)</term><term>Wood (microbiology)</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>ARN ribosomique 18S (analyse)</term><term>Acides nucléiques peptidiques (composition chimique)</term><term>Bois (microbiologie)</term><term>Hybridation fluorescente in situ (méthodes)</term><term>Microscopie de fluorescence (MeSH)</term><term>Mycelium (croissance et développement)</term><term>Mycelium (ultrastructure)</term><term>Phanerochaete (croissance et développement)</term><term>Phanerochaete (ultrastructure)</term><term>Polyporales (croissance et développement)</term><term>Polyporales (ultrastructure)</term><term>Sondes d'acide nucléique (composition chimique)</term></keywords><keywords scheme="MESH" type="chemical" qualifier="analysis" xml:lang="en"><term>RNA, Ribosomal, 18S</term></keywords><keywords scheme="MESH" type="chemical" qualifier="chemistry" xml:lang="en"><term>Nucleic Acid Probes</term><term>Peptide Nucleic Acids</term></keywords><keywords scheme="MESH" qualifier="analyse" xml:lang="fr"><term>ARN ribosomique 18S</term></keywords><keywords scheme="MESH" qualifier="composition chimique" xml:lang="fr"><term>Acides nucléiques peptidiques</term><term>Sondes d'acide nucléique</term></keywords><keywords scheme="MESH" qualifier="croissance et développement" xml:lang="fr"><term>Mycelium</term><term>Phanerochaete</term><term>Polyporales</term></keywords><keywords scheme="MESH" qualifier="growth & development" xml:lang="en"><term>Mycelium</term><term>Phanerochaete</term><term>Polyporales</term></keywords><keywords scheme="MESH" qualifier="methods" xml:lang="en"><term>In Situ Hybridization, Fluorescence</term></keywords><keywords scheme="MESH" qualifier="microbiologie" xml:lang="fr"><term>Bois</term></keywords><keywords scheme="MESH" qualifier="microbiology" xml:lang="en"><term>Wood</term></keywords><keywords scheme="MESH" qualifier="méthodes" xml:lang="fr"><term>Hybridation fluorescente in situ</term></keywords><keywords scheme="MESH" qualifier="ultrastructure" xml:lang="en"><term>Mycelium</term><term>Phanerochaete</term><term>Polyporales</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Microscopy, Fluorescence</term></keywords><keywords scheme="MESH" qualifier="ultrastructure" xml:lang="fr"><term>Microscopie de fluorescence</term><term>Mycelium</term><term>Phanerochaete</term><term>Polyporales</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">White rot fungus, Phanerochaete chrysosporium, and brown rot fungus, Postia placenta, grown on agar plates, were visualized by fluorescence in situ hybridization (FISH) using a peptide nucleic acid (PNA) probe. Mycelia grown on wood chips were also clearly detected by PNA-FISH following blocking treatment. To the best of our knowledge, this is the first report on the visualization of fungi in wood by FISH.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">23391931</PMID><DateCompleted><Year>2013</Year><Month>08</Month><Day>14</Day></DateCompleted><DateRevised><Year>2013</Year><Month>02</Month><Day>26</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Electronic">1347-6947</ISSN><JournalIssue CitedMedium="Internet"><Volume>77</Volume><Issue>2</Issue><PubDate><Year>2013</Year></PubDate></JournalIssue><Title>Bioscience, biotechnology, and biochemistry</Title><ISOAbbreviation>Biosci Biotechnol Biochem</ISOAbbreviation></Journal><ArticleTitle>Visualization of the mycelia of wood-rotting fungi by fluorescence in situ hybridization using a peptide nucleic acid probe.</ArticleTitle><Pagination><MedlinePgn>405-8</MedlinePgn></Pagination><Abstract><AbstractText>White rot fungus, Phanerochaete chrysosporium, and brown rot fungus, Postia placenta, grown on agar plates, were visualized by fluorescence in situ hybridization (FISH) using a peptide nucleic acid (PNA) probe. Mycelia grown on wood chips were also clearly detected by PNA-FISH following blocking treatment. 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MajorTopicYN="Y">ultrastructure</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D020072" MajorTopicYN="N">Polyporales</DescriptorName><QualifierName UI="Q000254" MajorTopicYN="N">growth & development</QualifierName><QualifierName UI="Q000648" MajorTopicYN="Y">ultrastructure</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D012337" MajorTopicYN="N">RNA, Ribosomal, 18S</DescriptorName><QualifierName UI="Q000032" MajorTopicYN="N">analysis</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D014934" MajorTopicYN="N">Wood</DescriptorName><QualifierName UI="Q000382" MajorTopicYN="N">microbiology</QualifierName></MeshHeading></MeshHeadingList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="entrez"><Year>2013</Year><Month>2</Month><Day>9</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2013</Year><Month>2</Month><Day>9</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2013</Year><Month>8</Month><Day>15</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>ppublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">23391931</ArticleId><ArticleId IdType="pii">DN/JST.JSTAGE/bbb/120777</ArticleId><ArticleId IdType="doi">10.1271/bbb.120777</ArticleId></ArticleIdList></PubmedData></pubmed><affiliations><list><country><li>Japon</li></country><region><li>Région de Kantō</li></region><settlement><li>Tokyo</li></settlement></list><tree><noCountry><name sortKey="Funada, Ryo" sort="Funada, Ryo" uniqKey="Funada R" first="Ryo" last="Funada">Ryo Funada</name><name sortKey="Matsunaga, Hiroshi" sort="Matsunaga, Hiroshi" uniqKey="Matsunaga H" first="Hiroshi" last="Matsunaga">Hiroshi Matsunaga</name><name sortKey="Nakaba, Satoshi" sort="Nakaba, Satoshi" uniqKey="Nakaba S" first="Satoshi" last="Nakaba">Satoshi Nakaba</name><name sortKey="Yoshida, Makoto" sort="Yoshida, Makoto" uniqKey="Yoshida M" first="Makoto" last="Yoshida">Makoto Yoshida</name></noCountry><country name="Japon"><region name="Région de Kantō"><name sortKey="Nakada, Yuji" sort="Nakada, Yuji" uniqKey="Nakada Y" first="Yuji" last="Nakada">Yuji Nakada</name></region></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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